How far are you with it? Did you do this yet:
Look close at Mason's monitor. Open component design 5.5.
See the 4 layers squares at left and Ryan's design at right.
Ryan's design shows the 4 sides. The puzzle on the left is by layers from top to bottom.
Start on bottom layer and copy the arrangement of the cubes.
Take note that this is a 4x3 grid. This gives a clue on which side to place the cubes on.
Click on a square on the left to place a cube. To erase, click on the bright green cube again.
When done, click on print design. I think that's right.
After that, you do this:
Go down to the lab. Go to the 3D printer left of the stairs.
Look at the monitor on the left and see your creation done on Mason's computer. Click on Print button.
This will take a long time to process. Come back later.
"Bleat, Watson -- unmitigated bleat!" ~ Sherlock Holmes